Basic Information
| Dataset | GSE133055 |
|---|---|
| Status | 2020-09-07 |
| Species | Homo sapiens |
| Source | NCBI GEO |
| Subcellular Localization | protrusion|cell body |
| PMID | 32946121 |
| Title | Identification of mRNAS enriched in endothelial cell protrusions |
| Citation | Costa G, Bradbury JJ, Tarannum N, Herbert SP. RAB13 mRNA compartmentalisation spatially orients tissue morphogenesis. EMBO J 2020 Nov 2;39(21):e106003. |
| Experimental Design | Cell bodies and protrusions were harvested with cell scrapers and RNA isolated with RNAqueous™-Micro Total RNA Isolation Kit (ThermoFisher Scientific) |
Sample Information
| BioProject | Sample Name | Localization | Source | Label |
|---|---|---|---|---|
| PRJNA549849 | GSM3899112 | Cell body | Human Umbilical Vein Endothelial Cells (HUVECs) | CB1 |
| PRJNA549849 | GSM3899113 | Cell body | Human Umbilical Vein Endothelial Cells (HUVECs) | CB2 |
| PRJNA549849 | GSM3899114 | Protrusion | Human Umbilical Vein Endothelial Cells (HUVECs) | PS1 |
| PRJNA549849 | GSM3899115 | Protrusion | Human Umbilical Vein Endothelial Cells (HUVECs) | PS2 |
Subcellular Localization Number
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Localization Differential Analysis
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Enrichment:
Specific Subcellular Localization
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Dynamic RNA Localization
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Specific Enrichment Analysis
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Specific RNA Ratio
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